Automated Shopify accounting for fast-growing ecommerce and retail brands

Bookkeep connects your Shopify stores and POS to your accounting system and posts accurate, accrual-based journal entries for every payout — with support for payout splitting and transfers, fulfillment-based revenue recognition, COGS, channel reporting, and sales tax automation.

Sales chart
Shopify

Shopify payouts and sales data are complex. Bookkeep makes them accounting-ready.

Automated journal entries by payout
Payout splitting & multi-bank settlement
Amazon/Marketplace & channel reporting (when fulfilled through Shopify)
Revenue recognition & deferred transactions
Bookkeep Managed COGS
Fees, taxes, and refunds fully accounted for
ShopifyShopify

Built for merchants who need clarity, not spreadsheets

Single-store & DTC brands

Automated daily journal entries and tax handling.

Franchise systems

Distribute payouts to franchisees and collect franchisor fees at settlement.

High-volume merchants

Eliminate manual posting for hundreds or thousands of orders.

Multi-location retailers & POS

Split deposits by store and reconcile location-level books.

Multi-channel brands (when fulfilled through Shopify)

Consolidate Shopify + marketplace channel revenue into unified, auditable entries.

How Shopify accounting automation works

Watch a short walkthrough of Bookkeep’s Shopify integration and multi-bank settlement workflows.

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