Multi-bank settlement for Shopify:
Split and transfer payouts by location, automatically
Bookkeep automates payout splitting across bank accounts by store, franchise, or fulfillment location—and transfers funds accordingly. Franchise fees? We collect those too.
Bookkeep handles the complexities of multi-location payout management—so you don’t have to.
Automated Payout Splitting by Location
Automatically split and transfer revenue and Shopify payouts by store, POS, franchise, or fulfillment location into multiple bank accounts.
Split by store or POS
Route funds automatically
Journal entries per location
Clean, Auditable Location-Level Accounting
Ensure accurate accounting records by posting detailed journal entries per store, franchisee, or business unit—automatically and without errors.
Accurate entries by entity
Audit-ready financials
No manual cleanup
Franchise Fee Collection at Payout
Withhold and route franchise fees automatically during payout distribution—before funds hit the bank.
Fees auto-withheld
Distribute net payouts
Simplify franchise ops
Gift Card & BOPIS Transfers
Easily manage complex workflows like gift card redemption and buy online/pick up in store with fulfillment-aware fund transfers.
Route gift card revenue
Support BOPIS payouts
Match bank to fulfillment
Shopify Payout Reconciliation, Automated
Every Shopify payout is tracked, matched, and reconciled down to the penny—no manual work or missing dollars.
Match deposits automatically
Track all fees and taxes
Reconcile to the penny
Built for the complexity ofreal Shopify businesses
Multi-location Shopify retailers
Split deposits and transfer funds by store bank, automatically
Franchise brands
Distribute payouts to franchisees and withhold fees at the point of settlement
In-store & ecommerce hybrids
Handle mixed revenue with fulfillment-aware fund distribution
Gift card redemption across stores
Transfer gift card revenue from issuing store to redemption store
Buy online, pick up in store (BOPIS)
Route revenue from online store to the fulfillment location’s bank
Accountants & finance teams
Ensure accurate, audit-ready records per location, without manual effort
What Shopify merchants are saying
See how Bookkeep provides financial clarity for leading Shopify brands.
“Today, we have the peace of mind that every transaction is perfectly reconciled and that every cent is properly distributed to our franchisees.”
Eric Fortier
Founder
“We now have real-time numbers that I’m confident are right, giving us the ability to do a lot more higher-level analysis, which is better decision-making for the business.”
Brian Thalman
Financial Controller
“I would just simply recommend Bookkeep because of the confidence that it gives when your transactions are posted and it tells me to expect a payment and then the payment comes in that, that boosts my confidence.”
Forrest Allen
Head of Accounting