Automated accounting for retailers using Shopify POS

Bookkeep connects Shopify POS to your accounting system and automates daily sales entries, fulfillment-based revenue recognition, deposit reconciliation, and full sales tax compliance — all by location, store, or franchise.

Trusted by top ecommerce and retail Shopify brands

Shopify POS accounting without the manual cleanup

Automated Shopify POS journal entries

Accrual-based, summary journal entries posted daily to QuickBooks, Xero, NetSuite, or Sage Intacct.
Posts daily summaries — not hundreds of individual receipts
Reflects sales, returns, taxes, and tips automatically
Eliminates manual entry errors across locations

Revenue by location

Track and book revenue, COGS, and payments by store location — clean, auditable, and accurate.
Automates revenue separation across locations
Supports granular cost tracking per store
Improves visibility into store-level performance

Multi-Store Reporting

Easily separate and report on financials across multiple Shopify POS locations or retail entities.
Automates reporting by location or entity
Enables P&L roll-ups or splits as needed
Aligns perfectly with your organizational structure

Integrated sales tax support

Track and file sales tax by jurisdiction based on Shopify POS settings — no spreadsheets needed.
Calculates and books tax at the time of sale
Automates jurisdiction-level filings
Syncs with your accounting platform for audit readiness

How retail accounting automation works

Watch how Bookkeep automates Shopify  journal entries, Revenue recognition and Payout splitting.

Helping your merchants stay financially compliant

Shopify Partners

Do you support retail merchants with POS implementations or back-office support? Partner with Bookkeep to automate accounting and tax compliance for your clients.

Partner with Us

Shopify Employees

Need a reliable accounting solution for a retail merchant you're working with? We’re here to help — with tools trusted by top Shopify brands.

Contact Us
Multi-bank settlement for Shopify

Split and transfer payouts by location, automatically

Bookkeep automates payout splitting across bank accounts by store, franchise, or fulfillment location—and transfers funds accordingly. Franchise fees? We collect those too.
Explore Payout Splitting
shopify bookkeep integration

Sales tax done for you

Bookkeep calculates, files, and remits sales tax based on your Shopify POS settings — for every state and jurisdiction. Stay compliant without downloading reports or logging into tax portals.
Explore Sales Tax Automation

What Shopify merchants are saying

See how Bookkeep provides financial clarity for leading Shopify brands.
Read Case Studies
Logo shop sante
“Today, we have the peace of mind that every transaction is perfectly reconciled and that every cent is properly distributed to our franchisees.”
eric fortier
Eric Fortier
Founder
wigs.com
“We now have real-time numbers that I’m confident are right, giving us the ability to do a lot more higher-level analysis, which is better decision-making for the business.”
brian thalman
Brian Thalman
Financial Controller
bohme
“I would just simply recommend Bookkeep because of the confidence that it gives when your transactions are posted and it tells me to expect a payment and then the payment comes in that, that boosts my confidence.”
forrest allen
Forrest Allen
Head of Accounting