Automated accounting for Shopify brands selling on multiple channels

Bookkeep syncs Shopify with Amazon, Walmart, Meta, PayPal, and more — posting clean, consolidated entries to your accounting system with accurate revenue recognition, deposit reconciliation, and sales tax compliance.

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Trusted by top ecommerce and retail Shopify brands

One accounting system for all your sales channels

Automated multi-channel journal entries

Accrual-based, daily summaries posted to your accounting system from each connected platform.

One entry per payout per channel

Works with QuickBooks, Xero, NetSuite, Sage Intacct

Reduces errors and closes books faster

Consolidated revenue reporting

See total revenue across Shopify, Amazon, PayPal, Walmart, and more — no spreadsheets required.

Roll up data by channel or payment method

Break down sales by item, category, or location

Spot revenue gaps or missing deposits instantly

Accurate accounting for every channel

Different platforms, same standards — Bookkeep enforces GAAP-aligned revenue recognition across all sales sources.

Recognize revenue when fulfilled, not paid

Support for deferred revenue and gift cards

Automatically maps transactions to correct accounts

Payout reconciliation

Track and reconcile every payout from every channel to your bank — down to the penny.

Automates sales, refunds, fees, and taxes

Matches deposits across multiple channels

Flags payout discrepancies automatically

Integrated sales tax support

Sync your tax settings from each channel and let Bookkeep handle the rest.

Files and remits taxes by jurisdiction

Supports multiple tax engines and rate structures

No manual downloads or portal logins required

How multi-channel automation works

See how Bookkeep automates entries across all your connected platforms — not just Shopify.

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Helping your merchants stay financially compliant

Shopify Partners

Supporting multi-channel Shopify merchants? Partner with Bookkeep to streamline accounting and tax across their entire stack.

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Shopify Employees

Need an accounting solution that handles more than just Shopify? We’ve got your merchants covered.

Multi-bank settlement for Shopify

Split and transfer payouts by location, automatically

Bookkeep automates payout splitting across bank accounts by store, franchise, or fulfillment location—and transfers funds accordingly. Franchise fees? We collect those too.

Explore Payout Splitting

Sales tax across all channels, filed for you

Selling on multiple platforms shouldn’t mean managing multiple tax portals. Bookkeep calculates, files, and remits sales tax based on each platform’s settings — all from one unified dashboard.

Explore Sales Tax Automation

What multi-channel brands say about Bookkeep

See how Bookkeep provides financial clarity for leading Shopify brands

Read Case Studies

“Today, we have the peace of mind that every transaction is perfectly reconciled and that every cent is properly distributed to our franchisees.”

Eric Fortier

Founder

“We now have real-time numbers that I’m confident are right, giving us the ability to do a lot more higher-level analysis, which is better decision-making for the business.”

Brian Thalman

Financial Controller

“I would just simply recommend Bookkeep because of the confidence that it gives when your transactions are posted and it tells me to expect a payment and then the payment comes in that, that boosts my confidence.”

Forrest Allen

Head of Accounting